Developer Guide
Developer documentation for extending and maintaining the system.
Patient Record Import API
Open Clinical History provides a REST-style API for submitting patient history documents directly into the clinical-history processing pipeline.
The API endpoint is:
history_api_import.php
For example:
https://www.openclinicalhistory.org/demo/history_api_import.php
The API can:
-
create or locate a patient
-
receive unstructured clinical history text
-
queue the document for extraction
-
process the document through the Open Clinical History extraction pipeline
-
monitor processing status
-
automatically audit and commit safe clinical events
-
manually initiate the audit/commit stage
-
inspect and manage the ingest queue
The API uses the same clinical processing pipeline and safety rules as the interactive patient-history importer.
API Processing Flow
A typical API import follows this sequence:
External Clinical System
|
| POST patient + document
v
history_api_import.php
|
v
Find/Create Patient
|
v
Store Source Document
|
v
Ingest Queue
|
v
queue_worker.php
|
v
Clinical Extraction
|
v
SNOMED Resolution
|
v
Anatomical Mapping
|
v
Clinical Audit
|
+---------------------------+
| |
v v
Safe event Needs review
| |
v v
Committed Unmatched/Learning Queue
|
v
Patient Clinical History
Processing is asynchronous.
A successful import request normally means:
The document has been accepted and queued for processing.
It does not mean extraction has already completed.
The caller should use the returned status URL to monitor progress.
Prerequisites
Before using the API:
-
Open Clinical History database migrations must be complete.
-
The API must be enabled in Admin → Configuration.
-
At least one API token must have been created.
-
The required LLM configuration must be available.
-
The SNOMED and image/SNOMED databases should have been built.
-
If the ingest queue is enabled,
queue_worker.phpmust be running.
Relevant configuration settings include:
api_enabled
api_require_https
api_default_auto_commit
api_max_upload_mb
queue_enabled
queue_max_attempts
queue_job_timeout
queue_lease_seconds
Authentication
Every API request requires an Open Clinical History API token.
Tokens are created under:
Admin → Configuration → API Tokens
The preferred authentication method is an HTTP Bearer token:
Authorization: Bearer och_your_token_here
A fallback header is also supported:
X-API-Token: och_your_token_here
Bearer authentication should be preferred.
Token security
API tokens are secrets.
They should:
-
never be embedded in publicly accessible client-side code
-
never be committed to source control
-
only be transmitted over HTTPS
-
be stored using the secret-management facilities of the integrating system
-
be revoked immediately if exposed
Open Clinical History stores only the SHA-256 hash of the token. The full plaintext token is displayed only once when it is created.
API Scopes
Tokens can carry three scopes.
| Scope | Purpose |
|---|---|
import |
Submit patient history documents |
status |
Read document, processing and queue status |
commit |
Run the clinical audit/commit process |
A normal integration using automatic commit generally requires:
import
status
commit
If auto_commit is enabled for an import, the calling token must have the commit scope as well as import.
A token without the required scope receives:
HTTP 403
with:
{
"ok": false,
"error": {
"code": "insufficient_scope",
"message": "This token does not carry the required scope."
}
}
HTTPS
By default:
api_require_https = enabled
Requests made without HTTPS are rejected.
The API recognises HTTPS through:
-
the PHP HTTPS server variable
-
server port 443
-
X-Forwarded-Proto: https
The latter allows Open Clinical History to operate correctly behind an HTTPS reverse proxy.
HTTPS should remain mandatory for environments containing clinical information.
Response Format
Every API response uses JSON.
Successful response:
{
"ok": true,
"data": {
}
}
Error response:
{
"ok": false,
"error": {
"code": "error_code",
"message": "Description of the error."
}
}
Applications should check both:
-
the HTTP status code; and
-
the
okproperty.
API Endpoints
The following actions are available.
| Method | Action | Scope | Purpose |
|---|---|---|---|
| GET | ping |
Valid token | Test authentication and API availability |
| POST | import |
import |
Submit a patient history |
| GET | status |
status |
Monitor extraction/import progress |
| GET | document |
status |
Retrieve the document processing summary |
| POST | commit |
commit |
Audit and commit extracted events |
| GET | queue |
status |
Inspect the ingest queue |
| POST | queue |
status + import |
Retry or cancel queue work |
It is recommended that callers always specify action explicitly.
Testing the Connection
Use:
GET history_api_import.php?action=ping
Example:
curl \
-H "Authorization: Bearer och_your_token_here" \
"https://www.openclinicalhistory.org/demo/history_api_import.php?action=ping"
A successful response resembles:
{
"ok": true,
"data": {
"build": "2026-08-22.api-v2-app-config-llm",
"token": {
"id": 4,
"label": "Clinical integration",
"scopes": [
"import",
"status",
"commit"
]
},
"date_format": "dd/mm/yyyy",
"queue": {
"enabled": true,
"depth": {
"queued": 0,
"running": 1,
"done": 42,
"failed": 0,
"cancelled": 0
}
},
"server_time": "2026-08-25T19:45:00+10:00"
}
}
This provides a useful initial connectivity test because it confirms:
-
the API is enabled
-
HTTPS is accepted
-
the token is valid
-
the token's available scopes
-
the configured date format
-
whether queue processing is enabled
Importing a Patient Record
Use:
POST history_api_import.php?action=import
The preferred request format is:
Content-Type: application/json
Example request:
{
"record_number": "MRN-1001",
"display_name": "Example Patient",
"dob": "1967-04-02",
"sex": "female",
"source_name": "hospital-discharge-summary.txt",
"text": "Patient clinical history goes here...",
"auto_commit": true,
"external_ref": "hospital-a:MRN-1001:discharge:84721"
}
Import Fields
record_number
Required
Example:
"record_number": "MRN-1001"
Maximum length:
64 characters
This is the primary external patient identifier used by the patient-import API.
Open Clinical History searches for an existing patient where:
patient_record_number = supplied record_number
source_system = history_import
If found, that patient is reused.
If not found, a new patient is created.
Important
The API is currently a find-or-create patient API, not a demographic-update API.
If the patient already exists, supplying different:
-
display name
-
DOB
-
sex
does not update the existing patient record.
The record_number should therefore be stable for the lifetime of the patient within the source integration.
display_name
Optional
Example:
"display_name": "Example Patient"
Used as the patient's human-readable display name when a new patient is created.
It is stored with the patient's attributes.
It is not used as the primary patient-matching key.
dob
Optional
Preferred format:
YYYY-MM-DD
Example:
"dob": "1967-04-02"
ISO dates are recommended for all machine integrations.
The API also accepts the date format configured under:
Admin → Configuration → Date format
For example:
02/04/1967
when the system is configured for dd/mm/yyyy.
Validation
The date:
-
must be valid
-
cannot be in the future
-
cannot have a year earlier than 1880
An invalid value produces:
bad_dob
Machine integrations should always use ISO YYYY-MM-DD to avoid regional date ambiguity.
sex
Optional
Accepted values are:
female
male
intersex
unknown
Values are case-insensitive.
If omitted:
unknown
is used.
An unrecognised value is currently normalised to:
unknown
rather than causing the request to fail.
source_name
Optional
Identifies the source document.
Example:
"source_name": "cardiology-letter-2026-08-25.txt"
Default:
api-upload.txt
A meaningful source name is strongly recommended because it makes individual documents easier to identify in Open Clinical History.
text
Required for JSON imports
Contains the complete unstructured source document.
Example:
"text": "12 March 2018 - Patient admitted with..."
The document can contain raw clinical text.
It does not need to be pre-classified into clinical events or SNOMED concepts.
Open Clinical History performs that processing.
The document must not be empty.
auto_commit
Optional
Boolean:
"auto_commit": true
or:
"auto_commit": false
If omitted, the value comes from:
api_default_auto_commit
in Admin → Configuration.
When true, the API token must have the:
commit
scope.
What auto-commit actually means
Auto-commit does not mean every extracted event is blindly inserted into the patient's clinical history.
After extraction, Open Clinical History performs its normal audit checks.
An event is automatically committed only when it satisfies the safety criteria.
Among other things, a proposal must:
-
pass its clinical audit
-
have a resolved SNOMED concept
-
have no unresolved mapping warnings
-
not represent a negated statement
-
not represent family history
-
not be merely a historical-summary statement
Safe events are committed.
Events that cannot be safely committed are rejected from automatic commit and routed to the unmatched/learning workflow for further resolution.
Conceptually:
Extracted proposal
|
v
Clinical audit
|
+---- safe -----------------> Commit
|
+---- uncertain/unsafe -----> Review/Learning Queue
This allows unattended imports without treating every AI-generated proposal as trusted clinical data.
external_ref
Optional but strongly recommended
Example:
"external_ref": "hospital-a:MRN-1001:discharge:84721"
This provides request-level idempotency.
If the same import request is retried with the same external_ref, Open Clinical History does not create another import.
Instead, it returns the existing document and its current processing state.
The response includes:
"duplicate": true
and returns HTTP:
200 OK
rather than creating a second queue item.
This is particularly important when an integration cannot determine whether an earlier HTTP request reached the server.
Recommended external reference design
Use a stable source-system identifier such as:
<system>:<patient>:<document-id>
For example:
hospital-a:MRN-1001:document-84721
or:
pms:48392:consultation-998312
The maximum stored length is approximately:
190 characters
The current implementation searches external_ref globally rather than per token, so integrations should ensure that external references are globally unique across Open Clinical History.
Optional priority
The JSON import endpoint also accepts:
"priority": 0
This controls ordering within the ingest queue.
Allowed effective values are:
-10 to +10
Higher numbers are processed before lower numbers.
For example:
"priority": 5
will be processed before a queued document with:
"priority": 0
Within the same priority, older queue items are processed first.
For normal integrations, leave this at:
0
unless there is a genuine requirement for priority processing.
Example JSON Import
curl -X POST \
"https://www.openclinicalhistory.org/demo/history_api_import.php?action=import" \
-H "Authorization: Bearer och_your_token_here" \
-H "Content-Type: application/json" \
-d '{
"record_number": "MRN-1001",
"display_name": "Example Patient",
"dob": "1967-04-02",
"sex": "female",
"source_name": "specialist-letter.txt",
"text": "Clinical document contents...",
"auto_commit": true,
"external_ref": "hospital-a:MRN-1001:letter-84721"
}'
Successful Import Response
When queue processing is enabled, a successful import normally returns:
HTTP 202 Accepted
with a response similar to:
{
"ok": true,
"data": {
"document_id": 142,
"patient_id": 27,
"queue_id": 81,
"queue_position": 2,
"state": "queued",
"auto_commit": true,
"external_ref": "hospital-a:MRN-1001:letter-84721",
"status_url": "/demo/history_api_import.php?action=status&doc=142",
"poll_after": 15
}
}
document_id
Open Clinical History identifier for the uploaded source document.
Keep this identifier when monitoring the import.
patient_id
Internal Open Clinical History patient identifier.
This may refer to:
-
an existing patient matched by
record_number; or -
a newly created patient.
queue_id
Identifier of the ingest queue item.
queue_position
Number of queued items currently ahead of this item.
Therefore:
0
means no queued items are ahead of it.
Queue positions can change while workers process other records.
state
Immediately after queue submission:
queued
is normally returned.
status_url
Relative URL that can be used to monitor the document.
Example:
/demo/history_api_import.php?action=status&doc=142
Authentication is still required when using this URL.
poll_after
Suggested number of seconds before polling again.
In queue mode the API currently returns:
15
seconds.
Clients should respect this value rather than aggressively polling the server.
Importing a File
The API also supports:
multipart/form-data
Use a file part named:
history
For example:
curl -X POST \
"https://www.openclinicalhistory.org/demo/history_api_import.php?action=import" \
-H "Authorization: Bearer och_your_token_here" \
-F "record_number=MRN-1001" \
-F "display_name=Example Patient" \
-F "dob=1967-04-02" \
-F "sex=female" \
-F "auto_commit=true" \
-F "external_ref=hospital-a:MRN-1001:document-84721" \
-F "history=@discharge-summary.txt"
When a file is uploaded, its filename becomes the document's source_name.
Maximum Document Size
The maximum accepted document size is controlled by:
api_max_upload_mb
under:
Admin → Configuration
Default:
2 MB
The limit applies to both:
-
JSON
text -
multipart
historyfiles
Documents exceeding the limit receive:
HTTP 413 Payload Too Large
with error code:
too_large
Character Encoding
Clinical text is expected to be UTF-8.
If uploaded text is not valid UTF-8, the current importer attempts to convert it from:
ISO-8859-1
to UTF-8 before storing it.
Integrating systems should supply UTF-8 directly wherever possible.
Duplicate Source Documents
Open Clinical History also calculates a SHA-256 hash of the normalised document text.
For a given patient, if identical document content has already been stored, the existing document can be reused rather than storing another physical copy.
However:
external_refshould still be used as the integration's primary idempotency mechanism.
The document hash protects against identical content. external_ref identifies the source-system transaction/document itself.
Monitoring an Import
Use:
GET history_api_import.php?action=status&doc=<document_id>
Requires:
status
scope.
Example:
curl \
-H "Authorization: Bearer och_your_token_here" \
"https://www.openclinicalhistory.org/demo/history_api_import.php?action=status&doc=142"
Import States
The high-level API state may be:
| State | Meaning |
|---|---|
queued |
Waiting for an ingest worker |
extracting |
Clinical extraction is running |
extracted |
Extraction finished; automatic commit was not requested |
committed |
Audit/commit processing has completed |
failed |
Processing failed after available attempts |
cancelled |
Queue work was manually cancelled |
A typical automatic-import sequence is:
queued
|
v
extracting
|
v
committed
Without auto-commit:
queued
|
v
extracting
|
v
extracted
The client can then explicitly call the commit endpoint.
Example Status Response
A status response can resemble:
{
"ok": true,
"data": {
"document_id": 142,
"patient_id": 27,
"source_name": "specialist-letter.txt",
"document_state": "committed",
"status_note": null,
"char_count": 18492,
"state": "committed",
"queue": {
"id": 81,
"state": "done",
"position": 0,
"attempts": 1,
"max_attempts": 3,
"available_at": "2026-08-25 19:40:10",
"started_at": "2026-08-25 19:40:12",
"finished_at": "2026-08-25 19:41:44",
"last_error": null
},
"auto_commit": true,
"external_ref": "hospital-a:MRN-1001:letter-84721",
"message": null,
"job": "7a2d4c9e14f0b581",
"extraction": {
"state": "done",
"phase": "complete",
"chunks_total": 5,
"chunks_done": 5,
"events": 19,
"requests": 7,
"tokens": 14231,
"started": 1787643612,
"updated": 1787643704,
"errors": []
},
"proposals": {
"proposed": 0,
"committed": 17,
"rejected": 2
},
"committed": 17,
"queued": 2,
"status_url": "/demo/history_api_import.php?action=status&doc=142"
}
}
The exact values depend on the document and current pipeline stage.
Understanding the Status Response
document_state
The current status stored against the source document itself.
This is distinct from the high-level API state.
For normal integrations, state should generally be used to decide what action to take next.
char_count
Number of characters in the stored source document.
queue
Contains ingest-queue information when queue mode is enabled.
queue.state
Possible queue-level states are:
queued
running
done
failed
cancelled
attempts
Number of times a worker has claimed the queue item.
A worker claim counts as an attempt even if that worker subsequently disappears.
max_attempts
Maximum number of processing attempts permitted before the item is permanently parked as failed.
last_error
The most recent queue processing error, if any.
A job that fails and is automatically retried may therefore have a last_error while returning to:
queued
Extraction Progress
The extraction object provides lower-level information about the extraction worker.
It may contain:
state
phase
chunks_total
chunks_done
events
requests
tokens
started
updated
errors
This can be used to provide richer progress information to an integrating application.
The extraction object may be:
null
before a worker job has been created.
Proposal Counts
The status response contains:
"proposals": {
"proposed": 0,
"committed": 17,
"rejected": 2
}
These are the extracted clinical event proposals associated with the document.
proposed
Events that still await a final decision.
committed
Events accepted into the patient's clinical history.
rejected
Events not automatically committed.
Rejected does not necessarily mean that the extracted clinical statement was incorrect.
It may mean that Open Clinical History could not safely establish:
-
an appropriate SNOMED concept
-
sufficient specificity
-
an appropriate anatomical mapping
-
a clean audit result
Such events can be routed through the unmatched/learning process.
A Note About the Top-Level queued Value
There are two different queue concepts in the API response.
queue
The object:
"queue": {
"state": "running"
}
describes the document ingest queue.
queued
The top-level numeric value:
"queued": 2
after the audit stage means that two extracted clinical events were routed to the unmatched/learning workflow rather than automatically committed.
It does not mean there are two documents ahead of this document in the ingest queue.
Status by Job Identifier
Status can also be requested using the extraction job identifier:
GET history_api_import.php?action=status&job=<job>
Example:
curl \
-H "Authorization: Bearer och_your_token_here" \
"https://www.openclinicalhistory.org/demo/history_api_import.php?action=status&job=7a2d4c9e14f0b581"
Job identifiers are 16 lowercase hexadecimal characters.
For most integrations, monitoring by:
document_id
is simpler.
Document Endpoint
Use:
GET history_api_import.php?action=document&doc=<document_id>
Requires:
status
scope.
Example:
curl \
-H "Authorization: Bearer och_your_token_here" \
"https://www.openclinicalhistory.org/demo/history_api_import.php?action=document&doc=142"
The current implementation returns the same assembled document-processing view used by document-based status requests.
This endpoint provides a semantic way for an integration to request the current summary for a known document.
Manual Commit
If the document was imported with:
"auto_commit": false
the normal completed state is:
extracted
To run the audit and commit stage:
POST history_api_import.php?action=commit&doc=<document_id>
Requires:
commit
scope.
Example:
curl -X POST \
-H "Authorization: Bearer och_your_token_here" \
"https://www.openclinicalhistory.org/demo/history_api_import.php?action=commit&doc=142"
A successful response resembles:
{
"ok": true,
"data": {
"document_id": 142,
"patient_id": 27,
"state": "committed",
"committed": 17,
"queued": 2,
"errors": []
}
}
Again:
committed
is the number of clinical events accepted into the clinical history.
queued
is the number routed to the unmatched/learning workflow.
Commit While Extraction Is Running
The API will not allow a document to be committed while extraction is still active.
It returns:
HTTP 409 Conflict
with:
still_extracting
The response includes a status_url that should be polled until extraction has finished.
Ingest Queue
When:
queue_enabled = true
API imports are placed into the controlled ingest queue.
This prevents a burst of API submissions from launching an unlimited number of LLM extraction processes.
The queue worker processes them in a controlled sequence.
Inspecting the Queue
Use:
GET history_api_import.php?action=queue
Requires:
status
scope.
Example:
curl \
-H "Authorization: Bearer och_your_token_here" \
"https://www.openclinicalhistory.org/demo/history_api_import.php?action=queue"
The response includes:
-
queue depth by state
-
recent queue items
By default the most recent:
25
items are returned.
A custom limit can be supplied:
?action=queue&limit=50
The API permits between:
1 and 100
items through this endpoint.
Inspecting One Queue Item
Use:
GET history_api_import.php?action=queue&id=<queue_id>
For example:
curl \
-H "Authorization: Bearer och_your_token_here" \
"https://www.openclinicalhistory.org/demo/history_api_import.php?action=queue&id=81"
The response includes the queue item and its current position.
Retry a Failed Queue Item
A failed or cancelled item can be reset and submitted again.
Use:
POST history_api_import.php?action=queue&id=<queue_id>&op=retry
Requires both:
status
import
scopes.
Retry:
-
changes the item back to
queued -
resets attempts to zero
-
makes the item immediately available
-
clears the previous worker lease
-
clears the previous queue error
Cancel a Queue Item
Use:
POST history_api_import.php?action=queue&id=<queue_id>&op=cancel
Requires:
status
import
scopes.
Cancellation is allowed when the queue item is:
queued
or:
failed
A currently running worker is not cancelled by this endpoint.
Automatic Queue Retries
If processing fails, the queue automatically retries until:
queue_max_attempts
has been reached.
Retry delay uses increasing quadratic backoff.
Conceptually, with successive failed attempts:
attempt 1 -> wait 60 seconds
attempt 2 -> wait 240 seconds
attempt 3 -> wait 540 seconds
The delay is capped at one hour.
Once all allowed attempts have been exhausted, the item is marked:
failed
Worker Leases
When a worker claims a queue item, it receives a temporary lease.
The lease is controlled by:
queue_lease_seconds
Workers extend their lease while long-running extraction is taking place.
If a worker crashes and its lease expires, the item can be returned to the queue rather than remaining permanently stuck in:
running
Recommended Client Workflow
A robust integration should use the following pattern:
1. Generate stable external_ref
|
v
2. POST action=import
|
+---- HTTP 202 ----+
| |
v |
Save document_id |
and queue_id |
| |
v |
3. Wait poll_after |
| |
v |
4. GET action=status |
| |
+---- queued ------+
|
+---- extracting --+
|
+---- committed ----------> Complete
|
+---- extracted ----------> POST commit if required
|
+---- failed -------------> Investigate/retry
|
+---- cancelled ----------> Stop/re-submit if appropriate
Do not continuously resubmit the original document while waiting.
Poll the status endpoint instead.
If network uncertainty makes a resubmission necessary, send the same external_ref.
Recommended Polling Behaviour
After submission, use the returned:
"poll_after": 15
value.
A simple client strategy is:
Submit
|
wait 15 seconds
|
check status
|
still processing?
|
yes -> wait again
|
no -> process result
There is no need to poll every second.
Clinical extraction may involve several model requests and can take some time for large documents.
Idempotent Retry Example
Initial request:
{
"record_number": "MRN-1001",
"text": "Clinical history...",
"external_ref": "hospital-a:document-84721",
"auto_commit": true
}
Suppose the client's connection fails before it receives the response.
The client may safely resend:
{
"record_number": "MRN-1001",
"text": "Clinical history...",
"external_ref": "hospital-a:document-84721",
"auto_commit": true
}
If the original submission was already accepted, the API returns the existing request with:
"duplicate": true
rather than intentionally creating another import.
Patient Matching Behaviour
Patient matching deserves particular attention when designing an integration.
Open Clinical History currently matches imported patients using:
patient_record_number
+
source_system = history_import
It does not currently match using:
-
display name
-
DOB
-
sex
-
document source
-
external reference
Therefore:
MRN-1001
must consistently refer to the same patient.
Existing patient
If the patient already exists:
reuse patient
New record number
If it does not exist:
create new patient
Consequently, changing a patient's external record number can create another Open Clinical History patient rather than updating the existing one.
Patient Asset Set
When a patient is first created by this API:
sex = male
selects the:
male
anatomical asset set.
The current implementation uses the:
female
asset set for the other sex values.
This affects the anatomical visual layers used when displaying the patient's history.
Date Handling Recommendation
Although Open Clinical History can accept the configured display format, integrations should always send:
YYYY-MM-DD
For example:
"dob": "1971-09-05"
rather than:
"dob": "05/09/1971"
This makes the payload independent of the user-interface date configuration and avoids ambiguity between Australian and US date formats.
HTTP Status Codes
Common HTTP responses include:
| HTTP | Meaning |
|---|---|
200 |
Request completed successfully |
202 |
Import accepted for asynchronous processing |
400 |
Invalid request or field |
401 |
Missing, invalid, expired or revoked token |
403 |
Token does not have the required scope |
404 |
Document, job or queue item does not exist |
405 |
Incorrect HTTP method |
409 |
Current state does not permit the requested operation |
413 |
Document exceeds the configured size limit |
422 |
Document/patient could not be stored or linked |
500 |
Internal application error |
503 |
API, queue or worker unavailable/configuration incomplete |
Common API Error Codes
Authentication
missing_token
invalid_token
insufficient_scope
Configuration
not_configured
api_disabled
https_required
queue_disabled
Request format
bad_json
method_not_allowed
unknown_action
missing_target
Document import
missing_text
empty_document
too_large
upload_failed
missing_record_number
bad_record_number
bad_dob
store_failed
link_failed
worker_unavailable
Processing
still_extracting
bad_job
not_found
Queue management
unknown_op
not_applicable
Example Error
An invalid date may return:
HTTP 400
{
"ok": false,
"error": {
"code": "bad_dob",
"message": "dob must be ISO YYYY-MM-DD or the configured display format (dd/mm/yyyy)."
}
}
Applications should use the machine-readable:
error.code
for program logic and treat:
error.message
as diagnostic information.
Queue Worker Requirement
When the ingest queue is enabled:
queue_enabled = true
submitting a document does not directly perform extraction.
It creates a queue item.
At least one instance of:
queue_worker.php
must therefore be running.
If no worker is running, submissions can still return:
202 Accepted
but will remain in:
queued
until a worker becomes available.
Queue health should therefore be monitored as part of production operations.
Behaviour Without the Queue
If the ingest_queue table is unavailable or:
queue_enabled = false
the API falls back to its earlier behaviour and spawns an extraction worker for each import.
The response still returns:
202 Accepted
but contains a job identifier rather than queue information.
The suggested poll interval becomes:
5 seconds
This mode is unbounded and is less appropriate for burst or high-volume integrations.
The controlled ingest queue is recommended.
API Security Model
API permissions are capability based.
A token with:
status
scope can currently query API document and queue status generally.
A token with:
commit
scope can request a commit for a supplied document identifier.
The current API does not restrict documents to the token that originally submitted them.
Therefore:
API tokens should currently be treated as trusted integration credentials for the Open Clinical History installation, rather than as isolated per-patient or per-tenant credentials.
Use least-privilege scopes and issue separate tokens for different integrations where appropriate.
Suggested Integration Requirements
A production integration should:
-
use HTTPS
-
store API tokens securely
-
use ISO dates
-
use a stable patient
record_number -
provide a meaningful
source_name -
provide a globally unique
external_ref -
store the returned
document_id -
respect
poll_after -
poll status rather than repeatedly submitting
-
handle asynchronous processing
-
handle failed imports explicitly
-
use API error codes rather than parsing error messages
-
avoid assuming every extracted event will be automatically committed
-
monitor ingest-queue health
Minimum JSON Request
The smallest valid JSON import is:
{
"record_number": "MRN-1001",
"text": "Clinical history text"
}
All other fields have defaults or are optional.
For a real integration, however, the recommended payload is:
{
"record_number": "MRN-1001",
"display_name": "Example Patient",
"dob": "1967-04-02",
"sex": "female",
"source_name": "specialist-letter-84721.txt",
"text": "Clinical history text...",
"auto_commit": true,
"external_ref": "source-system:MRN-1001:84721"
}
Recommended Production Sequence
Create API token
|
v
GET ping
|
v
POST import
|
v
Store document_id
|
v
Poll status
|
+---- queued/extracting ---> continue polling
|
+---- committed -----------> finished
|
+---- extracted -----------> commit if required
|
+---- failed --------------> investigate/retry
Summary
history_api_import.php provides the machine-to-machine entry point into the Open Clinical History patient-processing pipeline.
The API deliberately separates:
Submission
|
v
Asynchronous extraction
|
v
Clinical audit
|
v
Safe commit
This means external systems can provide raw, unstructured clinical records while Open Clinical History performs the extraction, SNOMED classification, anatomical mapping and clinical-safety checks required to turn those records into a longitudinal patient history.
The external system does not need to pre-classify the clinical content before submission.